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180 lines
4.9 KiB
C++
180 lines
4.9 KiB
C++
/*=========================================================================
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Program: Visualization Toolkit
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Module: vtkBlueObeliskDataParser.h
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Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
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All rights reserved.
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See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
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This software is distributed WITHOUT ANY WARRANTY; without even
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the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
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PURPOSE. See the above copyright notice for more information.
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=========================================================================*/
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/**
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* @class vtkBlueObeliskDataParser
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* @brief Fill a vtkBlueObeliskData
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* container with data from the BODR XML dataset.
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*
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*
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* The Blue Obelisk Data Repository is a free, open repository of
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* chemical information. This class extracts the BODR information into
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* vtk arrays, which are stored in a vtkBlueObeliskData object.
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*
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* \warning The vtkBlueObeliskDataParser class should never need to be
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* used directly. For convenient access to the BODR data, use
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* vtkPeriodicTable. For access to the raw arrays produced by this
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* parser, see the vtkBlueObeliskData class. A static
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* vtkBlueObeliskData object is accessible via
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* vtkPeriodicTable::GetBlueObeliskData().
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*
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* @sa
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* vtkPeriodicTable vtkBlueObeliskData
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*/
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#ifndef vtkBlueObeliskDataParser_h
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#define vtkBlueObeliskDataParser_h
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#include "vtkDomainsChemistryModule.h" // For export macro
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#include "vtkXMLParser.h"
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#include "vtkSmartPointer.h" // For vtkSmartPointer
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class vtkAbstractArray;
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class vtkBlueObeliskData;
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class vtkFloatArray;
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class vtkStdString;
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class vtkStringArray;
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class vtkUnsignedShortArray;
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class VTKDOMAINSCHEMISTRY_EXPORT vtkBlueObeliskDataParser : public vtkXMLParser
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{
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public:
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vtkTypeMacro(vtkBlueObeliskDataParser, vtkXMLParser);
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void PrintSelf(ostream& os, vtkIndent indent) override;
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static vtkBlueObeliskDataParser* New();
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/**
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* Set the target vtkBlueObeliskData object that this parser will
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* populate
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*/
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virtual void SetTarget(vtkBlueObeliskData* bodr);
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/**
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* Start parsing
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*/
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int Parse() override;
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//@{
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/**
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* These are only implemented to prevent compiler warnings about hidden
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* virtual overloads. This function simply call Parse(); the arguments are
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* ignored.
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*/
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int Parse(const char*) override;
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int Parse(const char*, unsigned int) override;
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//@}
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protected:
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vtkBlueObeliskDataParser();
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~vtkBlueObeliskDataParser() override;
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void StartElement(const char* name, const char** attr) override;
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void EndElement(const char* name) override;
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void CharacterDataHandler(const char* data, int length) override;
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void SetCurrentValue(const char* data, int length);
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void SetCurrentValue(const char* data);
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vtkBlueObeliskData* Target;
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bool IsProcessingAtom;
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void NewAtomStarted(const char** attr);
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void NewAtomFinished();
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bool IsProcessingValue;
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void NewValueStarted(const char** attr);
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void NewValueFinished();
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std::string CharacterDataValueBuffer;
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enum AtomValueType
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{
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None = 0,
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AtomicNumber,
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Symbol,
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Name,
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PeriodicTableBlock,
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ElectronicConfiguration,
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Family,
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Mass,
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ExactMass,
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IonizationEnergy,
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ElectronAffinity,
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PaulingElectronegativity,
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CovalentRadius,
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VDWRadius,
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DefaultColor,
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BoilingPoint,
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MeltingPoint,
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Period,
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Group
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} CurrentValueType;
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int CurrentAtomicNumber;
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vtkStdString* CurrentSymbol;
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vtkStdString* CurrentName;
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vtkStdString* CurrentPeriodicTableBlock;
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vtkStdString* CurrentElectronicConfiguration;
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vtkStdString* CurrentFamily;
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float CurrentMass;
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float CurrentExactMass;
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float CurrentIonizationEnergy;
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float CurrentElectronAffinity;
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float CurrentPaulingElectronegativity;
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float CurrentCovalentRadius;
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float CurrentVDWRadius;
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float CurrentDefaultColor[3];
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float CurrentBoilingPoint;
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float CurrentMeltingPoint;
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unsigned int CurrentPeriod;
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unsigned int CurrentGroup;
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private:
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vtkBlueObeliskDataParser(const vtkBlueObeliskDataParser&) = delete;
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void operator=(const vtkBlueObeliskDataParser&) = delete;
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//@{
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/**
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* Resize array if needed and set the entry at ind to val.
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*/
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static void ResizeArrayIfNeeded(vtkAbstractArray* arr, vtkIdType ind);
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static void ResizeAndSetValue(vtkStdString* val, vtkStringArray* arr, vtkIdType ind);
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static void ResizeAndSetValue(float val, vtkFloatArray* arr, vtkIdType ind);
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static void ResizeAndSetValue(unsigned short val, vtkUnsignedShortArray* arr, vtkIdType ind);
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//@}
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//@{
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/**
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* Parse types from const char *
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*/
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static int parseInt(const char*);
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static float parseFloat(const char*);
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static void parseFloat3(const char* str, float[3]);
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static unsigned short parseUnsignedShort(const char*);
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//@}
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//@{
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/**
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* Convert a string to lower case. This will modify the input string
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* and return the input pointer.
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*/
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static vtkStdString* ToLower(vtkStdString*);
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//@}
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};
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#endif
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