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/*=========================================================================
Program: Visualization Toolkit
Module: vtkCGNSReader.h
Copyright (c) Ken Martin, Will Schrodeder, Bill Lorensen
All rights reserved.
See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notice for more information.
=========================================================================*/
// Copyright 2013-2014 Mickael Philit.
/**
* @class vtkCGNSReader
*
* vtkCGNSReader creates a multi-block dataset and reads unstructured grids,
* and structured meshes from binary files stored in CGNS file format,
* with data stored at the nodes or at the cells.
*
* vtkCGNSReader is inspired by the VisIt CGNS reader originally written by
* B. Whitlock. vtkCGNSReader relies on the low level CGNS API to load DataSet
* and reduce memory footprint.
*
* @warning
* ...
*
* @par Thanks:
* Thanks to .
*/
#ifndef vtkCGNSReader_h
#define vtkCGNSReader_h
#include "vtkMultiBlockDataSetAlgorithm.h"
#include "vtkNew.h" // for vtkNew.
class vtkDataSet;
class vtkDataArraySelection;
class vtkCGNSSubsetInclusionLattice;
class vtkPoints;
class vtkUnstructuredGrid;
class vtkInformationStringKey;
namespace CGNSRead
{
class vtkCGNSMetaData;
}
class vtkMultiProcessController;
class vtkCGNSReader : public vtkMultiBlockDataSetAlgorithm
{
public:
static vtkCGNSReader* New();
vtkTypeMacro(vtkCGNSReader, vtkMultiBlockDataSetAlgorithm);
void PrintSelf(ostream& os, vtkIndent indent) override;
///@{
/**
* Specify file name of CGNS datafile to read
*/
vtkSetStringMacro(FileName);
vtkGetStringMacro(FileName);
///@}
/**
* Is the given file name a CGNS file?
*/
int CanReadFile(const char* filename);
/**
* Returns access to the base selection object.
*/
vtkDataArraySelection* GetBaseSelection();
/**
* Returns access to the family selection object.
*/
vtkDataArraySelection* GetFamilySelection();
///@{
/**
* API to select bases to read. These calls simply forward to the
* vtkDataArraySelection instance obtained from `GetBaseSelection()`.
*
* By default, 0-th base is enabled and all others are disabled.
*/
int GetBaseArrayStatus(const char* name);
void SetBaseArrayStatus(const char* name, int status);
void DisableAllBases();
void EnableAllBases();
int GetNumberOfBaseArrays();
const char* GetBaseArrayName(int index);
///@}
///@{
/**
* API to select families to read. These calls simply forward to the
* vtkDataArraySelection instance obtained from `GetFamilySelection()`.
*/
int GetNumberOfFamilyArrays();
const char* GetFamilyArrayName(int index);
void SetFamilyArrayStatus(const char* name, int status);
int GetFamilyArrayStatus(const char* name);
void EnableAllFamilies();
void DisableAllFamilies();
///@}
///@{
/**
* API to get information of point arrays and enable/disable loading of
* a particular arrays.
*/
int GetNumberOfPointArrays();
const char* GetPointArrayName(int index);
int GetPointArrayStatus(const char* name);
void SetPointArrayStatus(const char* name, int status);
void DisableAllPointArrays();
void EnableAllPointArrays();
///@}
///@{
/**
* API to get information of cell arrays and enable/disable loading of
* a particular arrays.
*/
int GetNumberOfCellArrays();
const char* GetCellArrayName(int index);
int GetCellArrayStatus(const char* name);
void SetCellArrayStatus(const char* name, int status);
void DisableAllCellArrays();
void EnableAllCellArrays();
///@}
vtkSetMacro(DoublePrecisionMesh, int);
vtkGetMacro(DoublePrecisionMesh, int);
vtkBooleanMacro(DoublePrecisionMesh, int);
///@{
/**
* Enable/disable loading of boundary condition patches.
* Defaults to false.
*/
vtkSetMacro(LoadBndPatch, bool);
vtkGetMacro(LoadBndPatch, bool);
vtkBooleanMacro(LoadBndPatch, bool);
///@}
///@{
/**
* Enable/disable loading of zone mesh. Defaults to true. It may be turned off
* to load only boundary patches (when LoadBndPatch if ON), for example.
*/
vtkSetMacro(LoadMesh, bool);
vtkGetMacro(LoadMesh, bool);
vtkBooleanMacro(LoadMesh, bool);
///@}
///@{
/**
* Enable/disable adding an empty physical dimension to vectors in case of 2D solutions.
*/
vtkSetMacro(Use3DVector, bool);
vtkGetMacro(Use3DVector, bool);
vtkBooleanMacro(Use3DVector, bool);
///@}
/**
* This option is provided for debugging and should not be used for production
* runs as the output data produced may not be correct. When set to true, the
* read will simply read each solution (`FlowSolution_t`) node encountered in
* a zone and create a separate block under the block corresponding to the
* zone in the output.
*/
vtkSetMacro(CreateEachSolutionAsBlock, int);
vtkGetMacro(CreateEachSolutionAsBlock, int);
vtkBooleanMacro(CreateEachSolutionAsBlock, int);
/**
* When set to true (default is false), the reader will simply
* ignore `FlowSolutionPointers` since they are either incomplete or invalid
* and instead will rely on FlowSolution_t nodes being labelled as
* "...AtStep<tsindex>" to locate solution nodes for a specific timestep.
* Note, tsindex starts with 1 (not zero).
*
* When set to false, the reader will still try to confirm that at least one
* valid FlowSolution_t node is referred to in FlowSolutionPointers nodes for the
* current timestep. If none is found, then the reader will print out a
* warning and act as if IgnoreFlowSolutionPointers was set to true. To avoid
* this warning, one should set IgnoreFlowSolutionPointers to true.
*/
vtkSetMacro(IgnoreFlowSolutionPointers, bool);
vtkGetMacro(IgnoreFlowSolutionPointers, bool);
vtkBooleanMacro(IgnoreFlowSolutionPointers, bool);
/**
* When set to true (default is false), the reader will try
* to determine to determine FlowSolution_t nodes to read with a pattern matching
* This can be useful for unsteady solutions when `FlowSolutionPointers` are not
* reliable
*/
vtkSetMacro(UseUnsteadyPattern, bool);
vtkGetMacro(UseUnsteadyPattern, bool);
vtkBooleanMacro(UseUnsteadyPattern, bool);
/**
* This reader can support piece requests by distributing each block in each
* zone across ranks (default). To make the reader disregard piece request and
* read all blocks in the zone, set this to false (default is true).
*/
vtkSetMacro(DistributeBlocks, bool);
vtkGetMacro(DistributeBlocks, bool);
vtkBooleanMacro(DistributeBlocks, bool);
///@{
/**
* This reader can cache the mesh points if they are time invariant.
* They will be stored with a unique reference to their /base/zonename
* and not be read in the file when doing unsteady analysis.
*/
void SetCacheMesh(bool enable);
vtkGetMacro(CacheMesh, bool);
vtkBooleanMacro(CacheMesh, bool);
///@{
/**
* This reader can cache the meshconnectivities if they are time invariant.
* They will be stored with a unique reference to their /base/zonename
* and not be read in the file when doing unsteady analysis.
*/
void SetCacheConnectivity(bool enable);
vtkGetMacro(CacheConnectivity, bool);
vtkBooleanMacro(CacheConnectivity, bool);
///@{
/**
* Set/get the communication object used to relay a list of files
* from the rank 0 process to all others. This is the only interprocess
* communication required by vtkPExodusIIReader.
*/
void SetController(vtkMultiProcessController* c);
vtkGetObjectMacro(Controller, vtkMultiProcessController);
///@}
/**
* Sends metadata (that read from the input file, not settings modified
* through this API) from the rank 0 node to all other processes in a job.
*/
void Broadcast(vtkMultiProcessController* ctrl);
/**
* Key used to put a family name in the meta-data associated with a node
*/
static vtkInformationStringKey* FAMILY();
protected:
vtkCGNSReader();
~vtkCGNSReader() override;
int FillOutputPortInformation(int port, vtkInformation* info) override;
int RequestData(vtkInformation*, vtkInformationVector**, vtkInformationVector*) override;
int RequestInformation(vtkInformation*, vtkInformationVector**, vtkInformationVector*) override;
vtkNew<vtkDataArraySelection> BaseSelection;
vtkNew<vtkDataArraySelection> FamilySelection;
vtkNew<vtkDataArraySelection> CellDataArraySelection;
vtkNew<vtkDataArraySelection> PointDataArraySelection;
int GetCurvilinearZone(
int base, int zone, int cell_dim, int phys_dim, void* zsize, vtkMultiBlockDataSet* mbase);
int GetUnstructuredZone(
int base, int zone, int cell_dim, int phys_dim, void* zsize, vtkMultiBlockDataSet* mbase);
vtkMultiProcessController* Controller;
vtkIdType ProcRank;
vtkIdType ProcSize;
private:
vtkCGNSReader(const vtkCGNSReader&) = delete;
void operator=(const vtkCGNSReader&) = delete;
char* FileName; // cgns file name
bool LoadBndPatch; // option to set section loading for unstructured grid
bool LoadMesh; // option to enable/disable mesh loading
int DoublePrecisionMesh; // option to set mesh loading to double precision
int CreateEachSolutionAsBlock; // debug option to create
bool IgnoreFlowSolutionPointers;
bool UseUnsteadyPattern;
bool DistributeBlocks;
bool CacheMesh;
bool CacheConnectivity;
bool Use3DVector;
// For internal cgio calls (low level IO)
int cgioNum; // cgio file reference
double rootId; // id of root node
double currentId; // id of node currently being read (zone)
//
unsigned int NumberOfBases;
int ActualTimeStep;
class vtkPrivate;
vtkPrivate* Internals;
friend class vtkPrivate;
};
#endif // vtkCGNSReader_h